YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20466560
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMISSSSIT SSLSLLSSSP EKLPLINPIQ RCPITYSGFR TASVNRAIRR QPQSPAVSAT  60
   61 ESRVSLVLAL PSQASSVSQR LLADLAMETA KYVFPKRFDS STNLEEAFMS VPDLETMNFR 120
  121 VLFRTDKYEI RQVEPYFVAE TIMPGETGFD SYGASKSFNV LAEYLFGKNT IKEKMEMTTP 180
  181 VVTRKVQSVG EKMEMTTPVI TSKAKDQNQW RMSFVMPSKY GSNLPLPKDP SVKIQQVPRK 240
  241 IVAVVAFSGY VTDEEIERRE RELRRALQND KKFRVRDGVS FEVAQYNPPF TLPFMRRNEV 300
  301 SLEVENKED

Type	Start	End	Confidence
Signal Peptide	1	20	0.91
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	309	0.99