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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4138137, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCTLILMLN VLLVLLGSWV FSGTASVSYD HRAIIVNGQR RILISGSVHY PRSTPEMWPG  60
   61 IIQKAKEGGV DVIQTYVFWN GHEPQQGKYY FEGRYDLVKF IKLVHQAGLY VHLRVGPYAC 120
  121 AEWNFGGFPV WLKYVPGISF RTDNGPFKAA MQKFTAKIVN MMKAERLYET QGGPIILSQI 180
  181 ENEYGPMEWE LGAPGKSYAQ WAAKMAVGLD TGVPWVMCKQ DDAPDPIINA CNGFYCDYFS 240
  241 PNKAYKPKIW TEAWTAWFTG FGNPVPYRPA EDLAFSVAKF IQKGGSFINY YMYHGGTNFG 300
  301 RTAGGPFIAT SYDYDAPLDE YGLLRQPKWG HLKDLHRAIK LCEPALVSGD PAVTALGHQQ 360
  361 EAHVFRSKAG SCAAFLANYD QHSFATVSFA NRHYNLPPWS ISILPDCKNT VFNTARIGAQ 420
  421 SAQMKMTPVS RGLPWQSFNE ETSSYEDSSF TVVGLLEQIN TTRDVSDYLW YSTDVKIDSR 480
  481 EKFLRGGKWP WLTIMSAGHA LHVFVNGQLA GTAYGSLEKP KLTFSKAVNL RAGVNKISLL 540
  541 SIAVGLPNIG PHFETWNAGV LGPVSLTGLD EGKRDLTWQK WSYKVGLKGE ALSLHSLSGS 600
  601 SSVEWVEGSL VAQRQPLTWY KSTFNAPAGN DPLALDLNTM GKGQVWINGQ SLGRYWPGYK 660
  661 ASGNCGACNY AGWFNEKKCL SNCGEASQRW YHVPRSWLYP TGNLLVLFEE WGGEPHGISL 720
  721 VKREVASVCA DINEWQPQLV NWQMQASGKV DKPLRPKAHL SCASGQKITS IKFASFGTPQ 780
  781 GVCGSFREGS CHAFHSYDAF ERYCIGQNSC SVPVTPEIFG GDPCPHVMKK LSVEVICS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle