YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3860384
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLVLLV VALFAVFLGT AHGIAKVPPG PNITATYGDK WLDAKSTWYG KPTGAGPKDN  60
   61 GGACGYKDVD KPPFSGMTGC GNTPIFKSGR GCGSCFEIKC TKPESCSGEP IVVHITDDNE 120
  121 EPIAAYHLDL SGKAFGAMAK KGEEQKLRSA GELELKFRRV KCEYPKGTKV TFHVEKGSNP 180
  181 NYLALLVKYV DGDGDVVAVD IKEKGKDKWI ELKESWGAVW RVDTPDKLTG PFTVRYTTEG 240
  241 GTKVEAEDVI PEGWKADTAY ESK

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	263	0.99