YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2129658, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTHRVDRT DRHFQFQSPY EGGRGQGQYE GDRGYGGGGY KSMMPESGPS STQVLSLLIG  60
   61 VPVVGSLLAL AGLLLAGSVI GLMVALPLFL LFSPVIVPAG LTIGLAMTGF LASGMFGLTG 120
  121 LSSISWVMNY LRGTKRTVPE QLEYAKRRMA DAVGYAGQKG KEMGQHVQNK AQDVKQYDIS 180
  181 KPHDTTTKGH ETQGGTTAA

Type	Start	End	Confidence
Cytoplasmic	1	56	0.74
Transmembrane Helix	57	91	0.75
Non-Cytoplasmic	92	95	0.55
Transmembrane Helix	96	127	0.75
Cytoplasmic	128	199	0.91