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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB28B_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATTLLFH HGSTRVLVAR RRCQASVLRP YGGLKPFLSF CSLPNSTAPF RDSLRAKSDG  60
   61 LARAYVTGAP PIVEEPDPKI EESKSEAESK DLISWGLLWS LMSKHKLRLS VCLLTLLGCS 120
  121 TCTLSMPVFS GRFFEVLIGV RPEPLWRLLS KIAVLYSLEP IFTIAFVTNM TAIWENVMAI 180
  181 LRAQIFRRVL IQKAEFFDKY KVGELTGLLT SDLGALNSIV NDNISRDRGF RAFTEVFGTI 240
  241 CILFTLSPQL APVLGLLMLA VSVLVAVYKR STVPVYKSHG LAQATMSDCV SETFSAIRTV 300
  301 RSFSGEKRQM SIFGSQILAY KLSGLKLGTF KSINESITRV AVYISLLALY CLGGSKVKTG 360
  361 ELAVGTVVSF IGYTFTLTFA VQGLVNTFGD LRGTFAAIDR INSILNAVDI DEALAYGLER 420
  421 DIHTKKVQDE NLKLFLSAGP NVNIRHLDKY YMSNLKSTNN LRTLTWAGDV CLDDVHFAYP 480
  481 LRPDVKVLDG LSLTLNSGTV TALVGSSGAG KSTIVQLLAR FYEPTQGRIT VGGEDVRMFD 540
  541 KSEWAKVVSI VNQEPVLFSL SVAENIAYGL PNEHVSKDDI IKAAKAANAH DFIISLPQGY 600
  601 DTLVGERGGL LSGGQRQRVA IARSLLKNAP ILILDEATSA LDAVSERLVQ SALNRLMKDR 660
  661 TTLVIAHRLS TVQSANQIAV CSDGKIIELG THSELVAQKG SYASLVGTQR LAFE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle