YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|224031477, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAALLRRSP AVRALLSPAL SSRLVASKPH SSSPAPPPPA KAASSTKTFS IYRWDPDSPS  60
   61 TKPHLKDYQV DLSDCGPMVL DALLKIKNEQ DPSLTFRRSC REGICGSCAM NIDGDNGLAC 120
  121 LTKISGASSA STVSPLPHMF VVKDLVVDMT NFYSQYKSVE PWLKRKDQPP QQGKEIPQTK 180
  181 ADRAKLDGMY ECILCACCST SCPSYWWNPE EYLGPAALLH ANRWIQDSRD QFTKERLDAI 240
  241 NDEFKLYRCH TIKNCTHACP KGLNPAKQID TIKKLQLGAP SA

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	282	0.99