YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1885310
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATAGALLA VVATVLLRGI AAAPPRKPVD VPFEKNYVPT WAEDHIHYVN GGREVQLSLD  60
   61 KTTGTGFQTR GSYLFGHFSM HIKLVGGDSA GTVTAFYLSS QNSEHDEIDF EFLGNRTGQP 120
  121 YILQTNVFSG GKGDREQRIY LWFDPTKDYH SYSVLWNLYM IAFFVDDTPI RVFKNSKDLG 180
  181 VRYPFDQPMK LYSSLWNADD WATRGGREKT DWSKAPFVAS YRGFHVDGCE ASAEAKLCAT 240
  241 QGARWWDQPE FQDLDAAQYR RLAWVRKEHT IYNYCTDRER YAAMSPECKR DRDV

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	294	0.99