YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6561267
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIAFSRAVLA GFLATLLFVF FGLGSALQWA SSPPSVLQIA VAFGLGIGIL VQALGHVSGA  60
   61 HINPAVTVAC LVGRHVSFLR AAFYVAAQLL GAVAGAAILH EITPVEIRGD LAVNALHNNA 120
  121 TAGQAVTVEL FLTMQLVLCI FASTDERRGD NLGSPALSIG FSVTLGHLLG I

Type	Start	End	Confidence
Cytoplasmic	1	7	0.91
Transmembrane Helix	8	30	0.91
Non-Cytoplasmic	31	36	0.83
Transmembrane Helix	37	60	0.85
Cytoplasmic	61	77	0.85
Transmembrane Helix	78	100	0.88
Non-Cytoplasmic	101	119	0.92
Transmembrane Helix	120	142	0.85
Cytoplasmic	143	150	0.82
Transmembrane Helix	151	170	0.74
Non-Cytoplasmic	171	171	0.81