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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|480998, gi|407049
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTYHFLPSR DLEHASSYTP LPDSPETRHE PDPDRSKTNR RPIKIVSSVL LATLIFSFVI  60
   61 FLLVNPNVQQ VVRKKVSKNS NGEDHNKASK SPEMLGPPSR GVSQGVSEKS FRQATAEPSY 120
  121 PWTNDMLSWQ RTSFHFQPQE NWMNDPNGPL FHMGWYHLFY QYNPDSAIWG NITWGHAISR 180
  181 DLINWLHLPF AMQPDQWYDI NGVWTGSATI LPDGKIVMLY TGDTDDLVQV QNLAYPANLS 240
  241 DPLLLDWIKY PDNPVMFPPP GIGSTDFRDP TTAWIGPDGK WRITIGSKVN KTGISLMYKT 300
  301 TDFITYELLD NLLHAVPGTG MWECVDFYPV SVTGSNGLDT SVNGPGVKHV LKSSLDDDRH 360
  361 DYYALGTYDP INDKWTPDNP ELDVGIGLRL DYGKYYASKT FYDQDKERRL LWGWIGESDN 420
  421 ESTDLLKGWA SVQSIPRTVV FDKKTGTNIL QWPVKEVESL RSRSYEINDV ELKPGSLVPL 480
  481 KISSAAQLDI VASFEVDEEA FKGTYEADAS YNCTASEGAA GRGILGPFGI LVLADDPLSE 540
  541 LTPVYFYIAK GVDGNAKTYF CADQSRSSTA SDVDKEVYGS DVPVLPGESL SMRLLVDHSI 600
  601 VESFAQGGRT VITSRVYPTR AIYSAARVFL FNNATGVSVT ASVKAWQMAS ATLKPFPFDQ 660
  661 L

YRC Informatics Platform - Version 3.0
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