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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7489415
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEREDRYVRF QDCKSEQSVI SENAVSPRRH CVFRSLKERT GGLFAFLGNF LRSETLKRSM  60
   61 LEDRKSMQNV FHPQGPFLQR WNKIFVLSCI FAVSVDPLFL YIPVINDKNL CWYLDRKMKI 120
  121 TASVLRSFTD IFYILHIIFQ FRTGFITSSS TNFGRGVLVE DRYAIAKRYL STYFLIDVCA 180
  181 VLPLPQVVIW IVLPTLQVSQ FMKAKNILML IVICQYVPRV IRIRPLYLQI TRSAGIITET 240
  241 AWAGAAFNLI IYMLASHVLG AVWYLLSIQR KDACWKQNCS LTRDCNPAYL YCGNGGTNAG 300
  301 NAFLQNVCVP NITKDNLPDP LFGIFVPAIN NVSQSTDFFA KLFYCVWWGL QNLSSLGQNL 360
  361 KTSTYAWENL FAVFVSISGL VLFSLLIGNM QTYLQSATLR IEETRVKSRD TDQWMSYRLL 420
  421 PDNLKERIRR YEQYRWQETS GVDEEHLLMN LPKDLRRAIK RHLCLSLLKR VPMFEKMDDQ 480
  481 LLNALCDCLK PVLYTEGGCI VREGDPVNEM FFITRGNLMS MTTNGGKTGF FNSDVLKSGD 540
  541 FCGEELLTWA LDPNSATSLP SSTRTVKSMS EVEAFALMAE DLKFVAMQFR RLHSKQLRHT 600
  601 FRFYSQQWRT WAACFIQAAW HRRCRKKMED ALREKEERLQ LAIVNDGSTS LSFGAAIYAS 660
  661 RFARNMMRTL RRNATRKARL QERVPARLLQ KPAEPNFSAE EQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle