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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12049721
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPYAAGVIV PLALTLLVRN AKKDKKRGVV VDDVGGEPGH TVRNHRFKDP VSSHWEDIST  60
   61 LPELFEISCK SHSDRFFLGT RRLIAREVET SEDGKVFEKL HLGDYEWKTF GETLEAVCSF 120
  121 ASGLVQIGHK SEERVAIFAD TREEWFIALQ GCFRRNVTVV TIYSSLGEEA LCHSLNETEV 180
  181 TTVICGNKEL KKLMDISQQL ETVKRVICMD DEFPSEASST WTTTSLADVQ KLGRESPVDP 240
  241 SFPLSADVAV IMYTSGSTGL PKGVMMTHGN VLATVSAVMT IVPDLGKRDT YMAYLPLAHI 300
  301 LELAAESVMA TIGSAIGYGS PLTLTDTSNK IKKGTKGDVT ALKPTIMTAV PAILDRVRDG 360
  361 VRKKVDAKGG AAKKLFDFAY ARRLSAINGS WFGAWGLEKL LWDVLVFGKI RAVLGGQLRY 420
  421 LLSGGAPLSG DTQRFINICV GAPIGQGYGL TETCAGGTFS EFDDTSVGRV GAPLPCSFVK 480
  481 LIDWPEGGYL ISDKPMPRGE IVIGGSNITL GYFKNEEKTK EVYKVDEKGM RWFYTGDIGQ 540
  541 FHPDGCLEII DRKKDIVKLQ HGEYVSLGKV EAALSISPYV ENIMVHADPF YSYCVALVVA 600
  601 AQQTLEGWAS KQGIEFTNFE ELCAKEQPVK EVYASLVKAA KQSRLEKFEI PAKIKVLAAP 660
  661 WTPESGLVTA ALKLKRDVIR KEFSEDLTKL YAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle