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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18103933
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAAAGMRD SALDLLAALL TGRAPPAAAD GDQNRRLLAL LATSLAVLVG CGVALLFRRS  60
   61 SSGAAPLAHK SAAAKPLAAK KDQEPDPDDG RQRVALFFGT QTGTAEGFAK ALAEEAKARY 120
  121 DKAVFKVLDL DDYAAEDEEY EEKLKKENIA FFFLATYGDG EPTDNAARFY KWFSEGNERG 180
  181 EWLSNLKFGV FALGNRQYEH FNKVGKEVDQ LLAEQGGKRI VPVGLGDDDQ CIEDDFNAWK 240
  241 ELLWPELDKL LRVEDNSSTA QSPYTAAIPQ YRVVLTKPED ATHINKSFSL SNGHVVYDSQ 300
  301 HPCRANVAVR RELHTPASDR SCIHLEFDIA GTSLTYETGD HVGVYAENSI ETVEEAEKLL 360
  361 DYSPDTYFSI YADQEDGTPL FGGSLPPPFP SPCTVRVALA RYADLLNSPK KSVLLALAAH 420
  421 ASDPKEAERL RHLASPAGKK EYSQWIIASQ RSLLEVISEF PSAKPPLGVF FAAIAPRLQP 480
  481 RYYSISSSPR MAPTRIHVTC SLVHGQTPTG RIHKGVCSTW MKNSTPLEES QECSWAPIFV 540
  541 RQSNFKLPAD PTVPIIMVGP GTGLAPFRGF LQERLALKET GVELGRAILF FGCRNRQMDF 600
  601 IYEDELNNFA ESGALSELVV AFSREGPTKE YVQHKMAEKA AELWSIVSQG GYVYVCGDAK 660
  661 GMARDVHRAL HTIVQEQGSL DSSKAEGYVK NLQMEGRYLR DVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle