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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20378272
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGACISKNSS ARVSRSSALS ASKQTVAASA PPGAAGDETS ATGAAEEASR NSLARVDGTR  60
   61 ASAAELERAP DGVCPDREEP GTANAEQGGV TEKKDTRETL AGMNSPKTLE AEAQEDDPKR 120
  121 EAPNQDVPSE APEGPKEKPG GDRKPAQKAI LKQDDSHTEE EKLNAHLAYR EKTPADFALI 180
  181 QDSLKANLVC SSLNEGEIDA LAVAMQFFTF KKGDVVTKQG EPGSYFFIIH SGTFDVLVND 240
  241 KRVNAMDKGK AFGEIALIHN TERSATVVAS STEGALWGVQ RHTFRETLKQ LSSRNFAENR 300
  301 QFLASVKFFE MLTEAQKNVI TNALVVENFK PGQPIVKEGD AGDVLYILKS GKAKVSIGGR 360
  361 EIRMLRKGDY FGERALLYKE PRSATITAEE FTVCVSIGRE LLDRVLGNLQ HVLFRNIMVE 420
  421 ALQQSKVYEL FQGDQLSKLI EAAVVKDYGA DYVILDKENK TKGIRFFFVL EGELSVYAYT 480
  481 QNPATKEEER KLAATLKRGQ AFGEEYVLNP TRPFNHYVKS VGPCKLALFT SSVLTATLGG 540
  541 EDIDETLDFN NKRAIIRKMY IFRYLSDHQM TMLIKAFKTV RYMSGEYIIK EGERGTRFFI 600
  601 IKAGEVAILK NNKRLRTLGR HDYFGERALL YDKPRTASVC ANSAGVDLWV VDKSVFNEII 660
  661 KGPMLAHLEE RIRMQDTKVE FQDLQVVRVV GRGTFGTVKL VRHVPTDIRY ALKCVSRRSV 720
  721 IALSQQQHIR LEREIMAEND HPFIIRLVRT FRDKEFLYFL TELVTGGELY DAIRKLGLLA 780
  781 RSQAQFYLAS IVLAIEYLHE RNIAYRDLKP ENILLDSQGY VKLIDFGCAK KMQGRAYTLV 840
  841 GTPHYMAPEV ILGKGYTLTA DTWAFGVCLY EFMCGPLPFG NDAEDQLEIF RDILTGKLVF 900
  901 PHYVTDQDAI NLMKRLLCRL PEVRIGCSIN GYKDIKEHAF FGDFDWDKLA GRGLPPPLAP 960
  961 KGETYAEDTE QSSFELDEDD TIVLEDEYDW DKDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle