YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28416547, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTDITALEK AQYPVVDRNP AFTKVVGNFS TLDYLRFSTI TGISVTVGYL SGIKPGIKGP  60
   61 SMVTGGLIGL MGGFMYAYQN SAGRLMGFFP NDGEVASYQK RGGFSK

Type	Start	End	Confidence
Cytoplasmic	1	33	0.67
Transmembrane Helix	34	53	0.60
Non-Cytoplasmic	54	58	0.41
Transmembrane Helix	59	79	0.86
Cytoplasmic	80	106	0.45