YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6561269
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQVTMVVAPL LLMASHNTLQ NFTAAIPPHH CRPPANANLS KDGGLEAWLP LDKQGQPESC  60
   61 LRFTSPQWGP PFYNGTEANG TRVTEPCIDG WVYDNSTFPS TIVTEWNLVC SHRAFRQLAQ 120
  121 SLYMVGVLLG AMVFGYLADR

Type	Start	End	Confidence
Cytoplasmic	1	118	0.83
Transmembrane Helix	119	138	0.89
Non-Cytoplasmic	139	140	0.80