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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BGA13_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL  60
   61 YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE PEQGKFNFSG RADLVKFIKL 120
  121 IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK 180
  181 EEKLFASQGG PIILGQIENE YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA 240
  241 PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF 300
  301 SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC 360
  361 KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT EAAEKIKFRG KEYLIPHRSI 420
  421 SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG 480
  481 LTKDESDYGW YTTSFKIDDN DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK 540
  541 SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK 600
  601 WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK 660
  661 GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK NLLVIFEEEP NVKPELIDFV 720
  721 IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN 780
  781 PNGTCGNFTL GSCNAPVSKK VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV 840
  841 KCGRDKKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle