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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BGA12_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW  60
   61 PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV KFIKVVQQAG LYVHLRIGPY 120
  121 VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS 180
  181 QIENEYGPIE WEIGAPGKAY TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN 240
  241 FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN 300
  301 FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK 360
  361 QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS VSILPDCKTE YYNTAKVQVR 420
  421 TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI 480
  481 SPDEKFLTGE DPLLTIGSAG HALHVFVNGQ LAGTAYGSLE KPKLTFSQKI KLHAGVNKLA 540
  541 LLSTAAGLPN VGVHYETWNT GVLGPVTLNG VNSGTWDMTK WKWSYKIGTK GEALSVHTLA 600
  601 GSSTVEWKEG SLVAKKQPLT WYKSTFDSPT GNEPLALDMN TMGKGQMWIN GQNIGRHWPA 660
  661 YTARGKCERC SYAGTFTEKK CLSNCGEASQ RWYHVPRSWL KPTNNLVIVL EEWGGEPNGI 720
  721 SLVKRTAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle