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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BGA11_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKHSLDRWL LTAVLVVLLS SSSSFAAKKD AKKKKKSNKE VTYDGTSLII DGKRELLYSG  60
   61 SIHYPRSTPE MWPSIIKRAK QGGLNTIQTY VFWNVHEPQQ GKFNFSGRAD LVKFIKLIQK 120
  121 NGMYVTLRLG PFIQAEWTHG GLPYWLREVP GIFFRTDNKQ FKEHTERYVR MILDKMKEER 180
  181 LFASQGGPII LGQIENEYSA VQRAYKQDGL NYIKWASNLV DSMKLGIPWV MCKQNDAPDP 240
  241 MINACNGRHC GDTFPGPNRE NKPSLWTENW TTQFRVFGDP PTQRSVEDIA YSVARFFSKN 300
  301 GTHVNYYMYH GGTNFGRTSA HYVTTRYYDD APLDEYGLEK EPKYGHLKHL HNALNLCKKP 360
  361 LLWGQPKTEK PGKDTEIRYY EQPGTKTCAA FLANNNTEAA ETIKFKGREY VIAPRSISIL 420
  421 PDCKTVVYNT AQIVSQHTSR NFMKSKKANK KFDFKVFTET LPSKLEGNSY IPVELYGLTK 480
  481 DKTDYGWYTT SFKVHKNHLP TKKGVKTFVR IASLGHALHA WLNGEYLGSG HGSHEEKSFV 540
  541 FQKQVTLKAG ENHLVMLGVL TGFPDSGSYM EHRYTGPRGI SILGLTSGTL DLTESSKWGN 600
  601 KIGMEGEKLG IHTEEGLKKV EWKKFTGKAP GLTWYQTYFD APESVSAATI RMHGMGKGLI 660
  661 WVNGEGVGRY WQSFLSPLGQ PTQIEYHIPR SFLKPKKNLL VIFEEEPNVK PELMDFAIVN 720
  721 RDTVCSYVGE NYTPSVRHWT RKKDQVQAIT DNVSLTATLK CSGTKKIAAV EFASFGNPIG 780
  781 VCGNFTLGTC NAPVSKQVIE KHCLGKAECV IPVNKSTFQQ DKKDSCKNVV KMLAVQVKCG 840
  841 RGKKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle