YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STR14_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLTSIATP YPSSSQALRL KSSGNTLFSA GVRSAAMVSG HKTLKIQCTS TKPAKPAAEV  60
   61 DWRQKRELLL EKRVRSVDVK EAQRLQKENN FVILDVRPEA EYKAGHPPGA INVEMYRLIR 120
  121 EWTAWDIARR LGFAFFGIFS GTEENPEFIQ SVEAKLDKEA KIIVACSSAG TMKPTQNLPE 180
  181 GQQSRSLIAA YLLVLNGYKN VFHLEGGIYT WGKEGLPVET IEED

Type	Start	End	Confidence
Signal Peptide	1	17	0.49
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	224	0.97