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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GT645_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEETTDNTG TISSQKNVAA SGHNHHHRYK YISNYGVGRR FLFFASCFGF YAFVAATYAW  60
   61 FVFPPHIGRT DHVSSSSLGC REDNEGSWSI GVFYGDSPFS LKPIETRNVW RNESGAWPVT 120
  121 NPVITCASFT NSGLPSNFLA DPFLYVQGDT LYLFFETKSP ITMQGDIGAA KSIDKGATWE 180
  181 PLGIALDEAW HLSFPFVFNY NGEIYMMPES NEIGQLNLYR AVNFPLSWKL EKVILKKPLV 240
  241 DSTIVHHEGI YWLIGSDHTG FGAKKNGQLE IWYSSSPLGT WKPHKKNPIY NGKRSIGARN 300
  301 GGRAFLYDGS LYRVGQDCGE NYGKRIRVSK IEVLSKEEYR EVEVPFSLEA SRKGKNSWNG 360
  361 VRQHHFDVKQ LSSGEFIGLV DGDRVTSGDL FHRVILGYAS LAAAISVVIL LGFLLGVVNC 420
  421 IVPSTWCMNY YAGKRTDALL NLETAGLFSE KLRRIGSRLN RVPPFLRGFV KPNSSMGKFT 480
  481 LGVIVILGLL LTCVGVRYIY GGSGAVEPYP FKGHLSQFTL ATMTYDARLW NLKMYVKRYS 540
  541 RCPSVKEIVV IWNKGPPPDL SELDSAVPVR IRVQKQNSLN NRFEIDPLIK TRAVLELDDD 600
  601 IMMPCDDIEK GFRVWREHPE RLVGFYPRFV DQTMTYSAEK FARSHKGYNM ILTGAAFMDV 660
  661 RFAFDMYQSD KAKLGRVFVD EQFNCEDILL NFLYANASGS GKAVEYVRPS LVTIDTSKFS 720
  721 GVAISGNTNQ HYRKRSKCLR RFSDLYGSLV DRRWEFGGRK DGWDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle