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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH8_ARATH
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSACLLG NGLSVYTTKQ RFQKLGLDRT SKVTVVKASL DEKKHEGRRG FFKLLLGNAA  60
   61 AGVGLLASGN ANADEQGQGV SSSRMSYSRF LEYLDKGRVE KVDLYENGTI AIVEAVSPEL 120
  121 GNRIQRVRVQ LPGLSQELLQ KLRAKNIDFA AHNAQEDQGS PILNLIGNLA FPVILIGGLF 180
  181 LLSRRSSGGM GGPGGPGFPL QIGQSKAKFQ MEPNTGVTFD DVAGVDEAKQ DFMEVVEFLK 240
  241 KPERFTAVGA RIPKGVLLVG PPGTGKTLLA KAIAGEAGVP FFSISGSEFV EMFVGVGASR 300
  301 VRDLFKKAKE NAPCIVFVDE IDAVGRQRGT GIGGGNDERE QTLNQLLTEM DGFEGNTGVI 360
  361 VVAATNRADI LDSALLRPGR FDRQVSVDVP DVKGRTDILK VHSGNKKFES GVSLEVIAMR 420
  421 TPGFSGADLA NLLNEAAILA GRRGKTAISS KEIDDSIDRI VAGMEGTVMT DGKSKSLVAY 480
  481 HEVGHAICGT LTPGHDAVQK VTLIPRGQAR GLTWFIPSDD PTLISKQQLF ARIVGGLGGR 540
  541 AAEEVIFGES EVTTGAVSDL QQITGLAKQM VTTFGMSEIG PWSLMDSSEQ SDVIMRMMAR 600
  601 NSMSEKLAND IDTAVKTLSD KAYEIALSQI RNNREAMDKI VEILLEKETM SGDEFRAILS 660
  661 EFTEIPPENR VASSTSTSTP TPASV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle