YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20269768
Protein type:	Globular with Signal Peptide
Type Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPSRANFG LLNWLIGWLL LLSMVLLRGY NAALAPTPPT TSTTTISPSN LLPYFDFDVP  60
   61 RNLTVTVGQT GFLHCRVERL GDKDVSWIRK RDLHILTAGG TTYTSDQRFQ VLRPDGSANW 120
  121 TLQIKYPQPR DSGVYECQIN TEPKMSLSYT FNVVELKAEI FGPSDLMVKT GSDINLTCKI 180
  181 MQGPHELGNI FWYKGSEMLD GKGENEIDSS MARIRVEDDW TDGLTSRLKI KRAMPGDTGN 240
  241 YTCVPTVAKT SSVYVHVIIG EHPAAMQHNS SSNSNSFYCG ICCMLLSIVS CCLQHFYETG 300
  301 CGYLHAAAAV AKSAGLGPPK RATLTTSETG ISAAEVASAA GASAAVASTL ATCNMLRERP 360
  361 AAIRCLS

Type	Start	End	Confidence
Signal Peptide	1	32	0.80
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	367	0.86