YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18101633
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLKSILPP AKGILPYYML ILSVVSIGNS LQAYATLHFS RRVYNGRFIR NPKLPPASAK  60
   61 FNPEDSPNKL VHAQNDPKAT DQLTPLAGRL FGTWTLITCI VRCYAAYHLH LGPVYNIAIW 120
  121 TYVVALGHFA SELFVFKSMT FGLPQIFPFT LATTALIWMP LVRSHYVEFE

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.47
Transmembrane Helix	14	37	0.83
Cytoplasmic	38	89	0.50
Transmembrane Helix	90	111	0.69
Non-Cytoplasmic	112	113	0.41
Transmembrane Helix	114	136	0.75
Cytoplasmic	137	140	0.36
Transmembrane Helix	141	162	0.83
Non-Cytoplasmic	163	170	0.34