YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28317248
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVRLWVRSF HKYDLLIAIG LITLIVYLCL PFRFASHYDY SEIIAENRFV YHLAHYHDAV  60
   61 QRGAEIRPGG EFRPEGCQAR YSTAIIVPYR QREEQLHAFL TYMHNYLPQQ LIHYRIFLVE 120
  121 QFDHKPFNRA MLFNIGAQVA AEYGFPCLIL HDVDLLPLNS GQIYACSERP RHMSSALDHW 180
  181 RFRLPYRGLF GGVVAINTAQ YQQINGMSNL YYGWGGEDDD LYERLQALNI DICRFAMEFS 240
  241 KYTMLKHKQE QPNANRVALL RSATLRQHSD GLNSLVYTEM ERRMHSLFTH ILVDT

Type	Start	End	Confidence
Cytoplasmic	1	12	0.65
Transmembrane Helix	13	35	0.70
Non-Cytoplasmic	36	295	0.91