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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28317185
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSQFFYFPWQ KFTFLTENLT RSIMETSSSS PVKPRRKDKD EDKFRIGATL AFIVVIIGIG  60
   61 VPMWWRTTTV YRVNLPSTEI LSLSKIPIKT AVQVAIYTQQ TSRGQLLIAE LQNAFSDNEI 120
  121 WSVEFKQLSP TPMTQEAHTP AALEKLLLEN HVQSVGDFMF IEWPKLQEEL LLTTERSALM 180
  181 RSDTPSNKIA QLLHAKILQT YRINQILSTD ERMGAKSEAP QPAYDVIVSV LNPKPRLTHA 240
  241 KWNIAMAVKT YIEPWLAKVS GVSNYTVRSQ WKYRVAIEAD LKQVRDQSKL GRHYALQETA 300
  301 LPHLLTSIAQ NLSASTTDKP AINLVVYIPP CHIAPLHIYN SKDQRLTRND VDAFISPPWG 360
  361 GFIIANPPEH VCLAAMSDQE AVPYHVSTTD NMQVMLDQLH KLLDISSELQ MEGVKVVDIE 420
  421 QLEPRRWEYE AYLRRSAIRH ISTASSTLQS LIKLLDQISY IVIDDEVGTA ITNSYADILA 480
  481 AKAALLEHRL ADASVLAKRA FVASERGFFD ASLLAQLYFP DEQKYAIYIP LFLPIMVPVL 540
  541 SSFNMLRGVL QARRKEKQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle