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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28317151
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CTCKPGFVIA QILCKQKKTS ICSMITLAPL IVLVLACLGN TASEKLPNIL LILSDDQDVE  60
   61 LRGMFPMEHT IEMLGFGGAL FHNAYTPSPI CCPARTSLLT GMYAHNHGTR NNSVSGGCYG 120
  121 PHWRRALEPR ALPYILQQHG YNTFFGGKYL NQYWGAGDVP KGWNNFYGLH GNSRYYNYTL 180
  181 RENTGNVHYE STYLSDLLRD RAADFLRNAT QSSEPFFAMV APPAAHEPFT PAPRHEGVFS 240
  241 HIEALRTPSF NQVKQDKHWL VRAARRLPNE TINTIDTYFQ KRWETLLAVD ELVVTLMGVL 300
  301 NDTQSLENTY IIYTSDNGYH VGQFAQPFDK RQPYETDINV PLLIRGPGIA PESHIDTAVS 360
  361 LVDLAPTILA WADIDTPSYM DGQSFHELLL NKRRRVPFFE RSLLIEYWGE GTLATFNPEC 420
  421 PWPEKDRLAQ CTPAADCHCQ DAWNNTYACL RNIRHREDRI YCEFRDNENF LEAYDLQLDP 480
  481 FQMTNIAYDL LPIERALYSL RLKNLTQCSG HSCFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle