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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220947896
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAADGVPP TAPAATATTA NSDLDLAARR RLFISQPSTL ATRRQQAVCV RRAHKMYGSS  60
   61 KNPNVVLDGL NMTVPKGSIY GLLGASGCGK TTLLSCIVGR RRLNSGEIWV LGGRPGSRGS 120
  121 GVPGPRIGYM PQEIALYGEF TMRETLIYFG IISAMSKGDI EDRTEFLLKL LNLPNASKFV 180
  181 KNLSGGQQRR VSLAVALLHE PELLILDEPT VGVDPVLRQS IWDHLVDITK NGHTTVIITT 240
  241 HYIDECAQAH MIGLLRGGKM LAEESPDYLR QQYNADSLED VFLKLSVLQN MGKRRRSSIA 300
  301 QEIVEQVTVP AISNPALDMS DEQHAAEISG EFGDNISMSS AARDPISTTA PAAPPLPPPQ 360
  361 EIPTSFWYNL HVMQSHHLHA LIWKNFLWMM RNVGVMLFIV GLPVVQILLF CYAIGHDPTG 420
  421 LKLAVANHEM SGEMIMEQFC PVHTGCNQTM LSCRYLDMLV KNKSMVVQYV TDDEMAYEEV 480
  481 RKGRAWAALV IQPNYTASLM ERVEDGRYAE DGTIESSDLA VRMDWSNQQI SQLLYRDLQY 540
  541 TFFNFVGDML SDCDVNPKLG RVPVDFQHPV YGYRNPNFTD FAAPGVILTI IFFLAVAVTS 600
  601 GAMLIDRNEG MLERCLVAGI TGPEILLSQV VTQFTVMLSQ TTFVLIVSFY FFELTLVGNI 660
  661 WLVVALCILN GLCGMSFGFV ISCAVDTERT ATYVAMGSFL PIVMLCGIIW PIEGMFPLLQ 720
  721 FFTAFLPLTK PTESMRSILQ RGWGIDNPVV YNGFISISSW VLVFLVLTIL LLKFKKG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle