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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28316911
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFQFGFQPSG SSRVIFIEKR ISLKMVAWLT VKSVAIFLGL ASTAFCVATI VLAVQNADLE  60
   61 NDLQDALDKI DALTVDTTST SSTSTSTSTT TTTANPNGPT DDTEPGSTTT PGVGGDTTPS 120
  121 AGTSPGGETS PSSSTGSTTN PIYPTLPTGL PDPEKIEWRL PTELTPIKYK VYYHPDLTTG 180
  181 ACEGTVSIQF QLNAITNLIV LHAKELNVHS ISILNMMARI RVAIDSINLD ESRELLLITL 240
  241 REVLSMNKAY TLSASFDYDL SSLVGSYISN YTNADGVDRS IISTKFEPTY ARQAFPCFDE 300
  301 PALKAQFTIT VARPSGDEYH VLSNMPVASE YVDGDITEVT FAETVPMSTY LAAFVVSDFQ 360
  361 YKETTVEGTS IALKVYAPPA QVEKTQYALD TAAGVMAYYI NYFNVSYALP KLDLVAIPDF 420
  421 VSGAMENWGL VTFRETALLY DESTSSSVNK QRVAIVVAHE LAHQWFGNLV TMNWWNDLWL 480
  481 NEGFASFLEY KGVKQMHPEW DMDNQFVIEE LHPVLTIDAT LASHPIVKSI ESPAEITEYF 540
  541 DTITYSKGAA LVRMLENLVG EEKLRNATTR YLVRHIYSTA TTEDYLTAVE EEEGLEFDVK 600
  601 QIMQTWTEQM GLPVVEVEKS GSTYKLTQKR FLANEDDYAA EAEASSFNYR WSIPITYTSS 660
  661 INSEVQSLIF NHNDNEATIT LPEEASWIKI NTNQVGYYRV NYGSEQWAEL ISALKNSRET 720
  721 FSTADRAHLL NDANTLAAAG QLNYSVALDL ISYLESEQDY VPWSVGTSAL ATLRNRVYYT 780
  781 DLYTNYTTYA RKLLTPIVEK VTFTVAADHL ENRLRIKVLS SACSLGHESS LQQAVTLFNQ 840
  841 WLASPETRPN PDIRDVVYYY GLQQVNTEAA WDQVWKLYLD ESDAQEKLKL MNCLTAVQVP 900
  901 WLLQRYINWA WDESNVRRQD YFTLLGYIST NPVGQSLVWD YVRENWEKLV DRFGINERTL 960
  961 GRLIPTITAR FSTETKLEEM QQFFAKYPEA GAGTAARQQA LEAVKANIKW LAANKAQVGE1020
 1021 WLANYVQQSS VTNRIQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle