YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20270720
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATFTILVL QVVICLAGAT EYQLTLDKDG LLAPCENQPG NPSGFEAMVD TSSLKVHNLG  60
   61 SKVRIEGEQK VVWKDVQPGD TLKVFGQVYR LDKGTWQKTM FTASSNNFCK NMFDKNQYWY 120
  121 NFWTKYISNS DEIKEKCLTT PGAVLKYKDY ELDLKTSLNV PNLDGRYKLV VQIEAFDKRN 180
  181 VRRPVPICIE FRGTSGQV

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	198	0.99