YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|226192721
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAFWKAVTAE FLAMLIFVLL SLGSTINWGG TEKPLPVDMV LISLCFGLSI ATMVQCFGHI  60
   61 SGGHINPAVT VAMVCTRKIS IAKSVFYIAA QCLGAIIGAG ILYLVTPPSV VGGLGVTMVH 120
  121 GNLTAGHGLL VELIITFQLV FTIFASCDSK RTDVTGSIAL AIGFSVAIGH LFAINYTGAS 180
  181 MNPARSFGPA VIMGNWENHW IYWVGPIIGA VLAGGLYEYV FCP

Type	Start	End	Confidence
Cytoplasmic	1	10	0.76
Transmembrane Helix	11	30	0.92
Non-Cytoplasmic	31	38	0.82
Transmembrane Helix	39	63	0.83
Cytoplasmic	64	83	0.86
Transmembrane Helix	84	105	0.93
Non-Cytoplasmic	106	122	0.91
Transmembrane Helix	123	145	0.90
Cytoplasmic	146	153	0.87
Transmembrane Helix	154	174	0.92
Non-Cytoplasmic	175	198	0.91
Transmembrane Helix	199	221	0.92
Cytoplasmic	222	223	0.88