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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28279468
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASILLRSCR GRGPARLAPP RAASPRGSLR DRACLSCTRT LGLTSRESVL SRCCTPAHPV  60
   61 YLCFKGEPLS CWTQRPECQG TAARTTWTPA SARLVVTGPQ YLPVRGWHSS SPLGEDSVIE 120
  121 KSLKSLKDKN KKLEEGGPVY SPPAQVVVRK SLGQKVLDEL RHYYHGFRLL WIDTKIAARM 180
  181 LWRILNGHTL TRRERRQFLR ICADLFRLVP FLVFVVVPFM EFLLPVVVKL FPNMLPSTFE 240
  241 TQSIKEERLK KELRVKLELA KFLQDTIEEM ALKNKAAKGN ATKDFSAFFQ KIRETGERPS 300
  301 NEEIMRFSKL FEDELTLDNL TRPQLVALCK LLELQSIGTN NFLRFQLTMR LRSIKADDKL 360
  361 ISEEGVDSLT VKELQAACRA RGMRALGVTE DRLKGQLKQW LDLHLHHEIP TSLLILSRAM 420
  421 YLPDTLSPAD QLKSTLQTLP EIVAKEAQVK VAEVEGEKVD NKAKLEATLQ EEAAIQQEHL 480
  481 EELKRASEAV KDIQPEVAEA TLPGRPGPEP QPPVDDVILP SEVLTDTAPV LEGLKGEEIT 540
  541 KEEIDILSDA CSKLQEQKKS LTKEKEELEL LKEDVQDYSE DLQEIKKELS KTGEEKYIEE 600
  601 SAASKRLSKR VQQMIGQIDG LITQLETTQQ DGKLGPSQST PTGESVISIT ELISAMKQIK 660
  661 HIPEHKLISL TSALDDNKDG NINIDDLVKV IDLVNKEDVQ ISTTQVAEIV ATLEKEKKKK 720
  721 KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle