YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125531411
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADCTTMRLA SSVTIILLLL VASQALVVSG ESSSSAMQSK TLNMNKLLNI SEDHSPNGGR  60
   61 HWMQRMQPDS CSEQNVVVYQ NNAEHLPSGI PTYSVEIINV CTACTVYDVH ISCGEFASAE 120
  121 LVDPSQFQRI GFNDCLVKGG GRLGPSEAVS FQYSNSFAYP LAVANVACFH YSIVWASMIP 180
  181 CLPEHACHTA SSVKGLGPRP HA

Type	Start	End	Confidence
Signal Peptide	1	30	0.92
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	202	0.97