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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|168829991
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLNISFILK GEMAMRSQKF TLLLLSLLLF LPLFLTNFIT PNLALADSPK QSQKIVGYFP  60
   61 SWGVYGRNYQ VADIDASKLT HLNYAFADIC WNGKHGNPST HPDNPNKQTW NCKESGVPLQ 120
  121 NKEVPNGTLV LGEPWADVTK SYPGSGTTWE DCDKYARCGN FGELKRLKAK YPHLKTIISV 180
  181 GGWTWSNRFS DMAADEKTRK VFAESTVAFL RAYGFDGVDL DWEYPGVETI PGGSYRPEDK 240
  241 QNFTLLLQDV RNALNKAGAE DGKQYLLTIA SGASQRYADH TELKKISQIL DWINIMTYDF 300
  301 HGGWEATSNH NAALYKDPND PAANTNFYVD GAINVYTNEG VPVDKLVLGV PFYGRGWKSC 360
  361 GKENNGQYQP CKPGSDGKLA SKGTWDDYST GDTGVYDYGD LAANYVNKNG FVRYWNDTAK 420
  421 VPYLYNATTG TFISYDDNES MKYKTDYIKT KGLSGAMFWE LSGDCRTSPK YSCSGPKLLD 480
  481 TLVKELLGGP INQKDTEPPT NVKNIVVTNK NSNSVQLNWT ASTDNVGVTE YEITAGEEKW 540
  541 STTTNSITIK NLKPNTEYKF SIIAKDAAGN KSQPTALTVK TDEANTTPPD GNGTATFSVT 600
  601 SNWGSGYNFS IIIKNNGTNP IKNWKLEFDY SGNLTQVWDS KISSKTNNHY VITNAGWNGE 660
  661 IPPGGSITIG GAGTGNPAEL LNAVISEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle