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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18025342
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRTHVVLA AAVPALLLVL LLRLHAAVAA DPPFSCGAPS SAAFCDRRLP IEQRAADLVS  60
   61 KLTLEEKISQ LGDESPAVDR LGVPAYKWWS EALHGVANAG RGVHLDGPLR AATSFPQVIL 120
  121 TAASFNPHLW YRIGQVIGTE ARGVYNNGQA EGLTFWAPNI NVFRDPRWGR GQETPGEDPT 180
  181 MTGKYAAVFV RGVQGYGMSG AINSSDLEAS ACCKHFTAYD LENWKGVTRF AFDAKVTEQD 240
  241 LADTYNPPFK SCVEDGGASG IMCSYNRVNG VPTCADHNLL SKTARGDWSF NGYITSDCDA 300
  301 VAIIHDVQGY AKAPEDAVAD VLKAGMDVNC GGYIQTHGVS AYQQGKITGE DIDRALRNLF 360
  361 AIRMRLGLFD GNPKYNRYGN IGADQVCSKE HQDLALQAAR DGIVLLKNDG AALPLSKSKV 420
  421 SSLAVIGPNG NNASLLLGNY FGPPCISVTP LQALQGYVKD ARFVQGCNAA VCNVSNIGEA 480
  481 VHAAGSADYV VLFMGLDQNQ EREEVDRLEL GLPGMQESLV NSVADAAKKP VILVLLCGGP 540
  541 VDVTFAKNNP KIGAIVWAGY PGQAGGIAIA QVLFGDHNPG GRLPVTWYPK EFTAVPMTDM 600
  601 RMRADPSTGY PGRTYRFYKG KTVYNFGYGL SYSKYSHRFA SKGTKPPSMS GIEGLKATAR 660
  661 ASAAGTVSYD VEEMGAEACD RLRFPAVVRV QNHGPMDGGH LVLLFLRWPN ATDGRPASQL 720
  721 IGFQSVHLRA DEAAHVEFEV SPCKHLSRAA EDGRKVIDQG SHFVRVGDDE FELSFMA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle