YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110755489, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTYYVIAAI LIAGATAQES FKCPDDFGFY PHHISCDKYW KCDNNVAELK TCGNGLAFDA  60
   61 SDSKFLTENC DYLHNVDCGD RTQLEPAIST PHCPRLYGIF PDEKKCDVFW NCWNGEASKY 120
  121 QCSPGLAYDR EARVCMWADQ VPECKNEEVA GGFTCPAAGE VSGASGSFSR HAHPDDCRKY 180
  181 YICLEGIARE YGCPIGTVFK IGDADGSGAC EDPEDVPGCE DYYGDLDLKS IRKSELLAGI 240
  241 QNSGETRKPP QGKPRPPSAP ARPNASLQE

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	269	0.99