YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20259884, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLHHFKRI SISRSLFSFS NATSPGAVTT RRSLYSLSRS LLSSTPYAAG GCCRETPPLH  60
   61 SPWSALQRRG VKVNAIQLRA GNVIERTGRT FRVVEAEHKQ QGRGGASIQV ELRDVDTGNK 120
  121 LNLRFGSEES VEKVFVEEKS FTCLYAEGDT AYLIEPNTFE QVEVPLDIFG KAAVYLKEEM 180
  181 KVQLQLYDGR ALSASIPKHI TCTVVETQLP MKGLTSAPRY KRALLDNGST IQVPSYLEAG 240
  241 EKIVINTEDD SFVKRDNK

Type	Start	End	Confidence
Signal Peptide	1	29	0.54
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	258	0.99