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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MNS3_ARATH
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC  60
   61 LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR LSPDEGQLRG SSTNGSTISN 120
  121 SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI 180
  181 MGLDNIVSEA GSWVETHLLE RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV 240
  241 GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE 300
  301 FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY 360
  361 EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS IPKGLVFVGE LPYGSKGEFS 420
  421 PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT 480
  481 GLAPEIAYFH TKDYTEDGLD GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD 540
  541 TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD 600
  601 DSVIPLDKFV FNTEAHPLPI RRNT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle