YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48128367, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKYYCDYCD TYLTHDSPSV RKTHCQGRKH KDNVKYFYQK WMEEQAQHLI DATTAAFKAG  60
   61 KIASNPFAAN KGAAIPPPPN LGPRPGVPPQ GPPGMMPPPG MHPGGPMGPG GPMMMGPHGP 120
  121 MPPMMGMRPP MMGPMGPMGP MMGPMGPMGP MRPPMNGPPP PMGGPPPMKK

Type	Start	End	Confidence
Cytoplasmic	1	130	0.60
Transmembrane Helix	131	151	0.58
Non-Cytoplasmic	152	170	0.84