YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ICMT_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQSEIVKLN KIKAKSAWLK KGAARSSAIS CGLGIGIGFG IALFIFSQTL RGFGIYLAGL  60
   61 CTFHMWEYIW VTMYHPDKLS SKSFLLNHSP QFNMALLISF IEFWIEWYFF PSLKTFSLWW 120
  121 VGAICMVFGQ IVRSVAMDTA GSNFTHLVQE EKRDDHVLVT NGIYQYMRHP SYFGWFVWSV 180
  181 STQVILMNPI SIIGFGWASW SFFSQRIENE EDYLIQFFGK SYKDYKKSVW SGIPGIH

Type	Start	End	Confidence
Cytoplasmic	1	22	0.95
Transmembrane Helix	23	46	0.89
Non-Cytoplasmic	47	52	0.80
Transmembrane Helix	53	72	0.89
Cytoplasmic	73	88	0.75
Transmembrane Helix	89	108	0.83
Non-Cytoplasmic	109	115	0.69
Transmembrane Helix	116	137	0.84
Cytoplasmic	138	174	0.80
Transmembrane Helix	175	198	0.89
Non-Cytoplasmic	199	237	0.80