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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|840708
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKTVVGASR MFWLMFFVPL LLALCPSEPA HALAPGSSRV ELFKRQSSKV PFEKGGKVTE  60
   61 RVVHSFRLPA LVNVDGVMVA IADARYETSN DNSLIDTVAK YSVDDGETWE TQIAIKNSRA 120
  121 SSVSRVVDPT VIVKGNKLYV LVGSYNSSRS YWTSHGDARD WDILLAVGEV TKSTAGGKIT 180
  181 ASIKWGSPVS LKEFFPAEME GMHTNQFLGG AGVAIVASNG NLVYPVQVTN KKKQVFSKIF 240
  241 YSEDEGKTWK FGEGRSDFGC SEPVALEWEG KLIINTRVDY RRRLVYESSD MGNSWVEAVG 300
  301 TLSRVWGPSP KSNQPGSQSS FTAVTIEGMR VMLFTHPLNF KGRWLRDRLN LWLTDNQRIY 360
  361 NVGQVSIGDE NSAYSSVLYK DDKLYCLHEI NSNEVYSLVF ARLVGELRII KSVLQSWKNW 420
  421 DSHLSSICTP ADPAASSSER GCGPAVTTVG LVGFLSHSAT KTEWEDAYRC VNASTANAER 480
  481 VPNGLKFAGV GGGALWPVSQ QGQNQRYHFA NHAFTLVASV TIHEVPSVAS PLLGASLDSS 540
  541 GGKKLLGLSY DEKHQWQPIY GSTPVTPTGS WEMGKRYHVV LTMANKIGSV YIDGEPLEGS 600
  601 GQTVVPDGRT PDISHFYVGG YGRSDMPTIS HVTVNNVLLY NRQLNAEEIR TLFLSQDLIG 660
  661 TEAHMGSSSG SSAHSTPSTP ADNGAHSTPS TPADSSAHST PSTPADSSAH STPSAPGDNG 720
  721 AHSTPSTPGD SSAHSTPSTP ADNGAHSTPS APADSNAHST PSTPADNGAH STPSTPADNG 780
  781 AHSTPSTPGD NGAHSTPSTP GDSSAHSTPS TPADNGAHST PSAPADSNAH STPSTPGDNG 840
  841 AHSTPSAPAD SNAHSTPSTP ADSSAHSTPS APGDNGAHST PSAPADSSAH STPSAPGDNG 900
  901 AHSTPSAPAD NGAHSTPSAP GDSNAHSTPS TPADSSAHST PSTPADSSAH STPSAPGDNG 960
  961 AHSTPSAPAD SSAHSTPSIP GDSSAHSTPS APADSSAHST PSAPGDNGAH STPSTPADNG1020
 1021 ANGTVLILHD GAAFSAFSGG GLLLCAGALL LHVFVMAVFF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle