YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MIRO1_ARATH
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARYAAGAVD CPGSPKSVRI VVVGDKGTGK SSLIVAAATD SFPPNVPPVL PDYKLPIEFF  60
   61 PDGIPVTIVD TSSRPEDRDI VAEELKRADA VVLTYACDRP ETLERLSEYW LPELRRLEVK 120
  121 IPIIVAGCKL DFRDDNNQVS LEQVMSPIMQ QFREIETCIE CSALKQLQAQ EVFYYAQKTV 180
  181 LHPTGPLFDQ DSQALKPRCV RALKRIFILC DHDRDGALSE AELNDFQVKC FHAPLQPSEI 240
  241 EGVKRVVQEK LPEGVNERGL TVTGFLFLHA LFIEKGRLET TWTVLRKFGY NNDIRLAEEL 300
  301 LPSAIFKRAP DQSFELTNAA IDFLKGMYML FDDDQDNNLR PQEIEDLFST APESPWKEAP 360
  361 YEDAAEKTAL GGLSFDAFLS MWSLMTLLEP ARSVENLIYI GFPGDPSTAI RVTRRRRLDR 420
  421 KKQQCERKVF QCFVFGPNNA GKSALLNCFL GRSYTDNQES TTDERYAVNM VDESGAKKTL 480
  481 IMREIPEDGV QGLFSSKESL AACDIAVFVY DSSDESSWKR ATQLLVEVAN YGEATGYEVP 540
  541 CLMVSAKDDL DSSPISIQES TRMTQDMGIE PPVSISSKLG DFNNLFRKIL TAAQHPHLSI 600
  601 PETEAGKSRK HYNRLINRSL MAVSIGAAAV VVGLAAYRVY ATRKSSSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle