YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21104010
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYHKYGLIGA CGDADQEDFI VQFDDEQLAH VDFKEQKDVI TLPEFADQAV LPPIYVDAKR  60
   61 AEFNCKAYLA VLREVYASSP EVLEPPWSSI YPKSDPQLNI KNTLICHVTG FFPPPVRVLW 120
  121 TKNNVNVTDG STISRYYPNK DGTMNVFSRL SFIPEESDIY SCSVEHKALQ QPQTRTWDVE 180
  181 VKQPSIGPSM FCGVGLGLGL LGFATGVFFT AKGNNCN

Type	Start	End	Confidence
Cytoplasmic	1	188	0.65
Transmembrane Helix	189	211	0.83
Non-Cytoplasmic	212	217	0.68