YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21104007
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEHEAIQFQV CSNTEQEFFI GYDGEEIWHA DFAQKRGVDT SPKFADDVTF PGFYERAIQY  60
   61 ISGCKSNLLV FIKSFKNPPP EMDAPQTSIY SKGYVQLGVQ NTLVCHVTGF YPPFVNISWT 120
  121 KNNVIVTEGM RLSLYHPRLD GTFNIFSTLT FMPAEGDIYS CTVDHEALQG QPQTKLWDVD 180
  181 VVLPSVGPLV FCGVGLTLGL LGLAIGTFFI VKGKNCH

Type	Start	End	Confidence
Non-Cytoplasmic	1	186	0.51
Transmembrane Helix	187	211	0.86
Cytoplasmic	212	217	0.71