YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21104005
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VREELEIYVC SDSESEAMVG ADGEELWHAD FKQKTGIITL PDFADRIGFP GFYEISVDSI  60
   61 AGCRRNLANN IRGFKSPPPA MDAPHSSVYP KDDVELGVQN SLICHATGFY PPSITISWKK 120
  121 NNNNVTESIN LSQYRPRADG SFNIFSTLKF TPAEGDIYSC TVNHEALQGQ AQTKTWDVDV 180
  181 ALPSAFPAVV CGVGVVFGLL GIAAGTFLL

Type	Start	End	Confidence
Cytoplasmic	1	183	0.81
Transmembrane Helix	184	207	0.86
Non-Cytoplasmic	208	209	0.75