YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21104003
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEHEVNQIQV CSNTEQEFFI GYDGEEIWHA DIAHRRGVKT TPSFAQYAVI PDIYERALAF  60
   61 LDFCKYDLHA YIKYFNNPPP EMDAPQTSIY SKGNVQLGIQ NTLVCHVTGF YPPFVNISWT 120
  121 KNNVIVTEGM SLSQYHPRVD GTFNIFSTLK YTPAEGDIYS CTVNHRTLQG QPQTRIWDVD 180
  181 VVLPNFGPSV FCGVGLTIGL LSVAIETFFL FKRKKSN

Type	Start	End	Confidence
Non-Cytoplasmic	1	189	0.79
Transmembrane Helix	190	211	0.82
Cytoplasmic	212	217	0.81