YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21464292
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLNLGPTD LCTANPRLIY ARLTGFGQHG RLAQRAGHDI NYAALSGVLS MLGRRHEKVT  60
   61 APINILADFA GGSLMCALGI CLALLERHRS GKGQVVDASM VEGAAYVASW LFMSRNLVIW 120
  121 GRERGDNLVD GGSFFYDTYE TKDGRYMSVG ALEPQFFEML KQRLELPEDV SQFGEEHQVR 180
  181 GRKLLTEAFL SKTQAEWSQI FEDVDACVYP VLDYREVHRH DHNIQRNSFE VTEDTATPRP 240
  241 APVLSRTPGK LPKATDGAQV EWMDELDLKP DEFKDLLDSG VLSLPERAKL

Type	Start	End	Confidence
Cytoplasmic	1	62	0.73
Transmembrane Helix	63	85	0.80
Non-Cytoplasmic	86	290	0.53