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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27819862
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGGVVVILG LTGRNFAAGM SGGIAYVYDL DGSFKPKVNP ESVELLPLEI EKDVLLVKEL  60
   61 LADFIEKTGS KVAKELLDNW AEAQGKFVKV FPYEYQKALK DMAEQQAVEQ PLKSAIENGN 120
  121 GKHEPHIKDI EEAIQDVVLE QKRADRVLDK TRGFVKYKRE SAPYRDAGER QKDWDEVYNF 180
  181 PHVRKNLKVQ AARCMECGVP FCQSNSTGCP LGNIIPKWND LVFHGEWQEA LRQLLQTNNF 240
  241 PEFTGRVCPS PCEGSCVLGI SEPAVTIKNI ECAIIDHAFE QGWIKPEIPE VRTGKRVAIV 300
  301 GSGPSGLAAS QQLNRAGHFV TVFERNDRVG GLLQYGIPTM KLSKEVVKRR VDLMADEGIE 360
  361 FRTNVHVGKD LKAEQLLQEY DAVLLTTGST WPRDLPLANR DLKGIHFAME FLEAQQKKQL 420
  421 GGKNDIISAA GKNVIIIGGG DTGCDCIATS LRQGAKSITT FEILPEPPQK RAQDNPWPQW 480
  481 PKVFRVDYGH EEVKLKWGKD PRQYCTTTKE FVGENGAIKG VNTVEVEWTK TETGQWRMQE 540
  541 VAGSEKYFPA DLILLAMGFL GPEKTVPSEL GLELDPRGNI KASNGQYGTS NSKVFAAGDC 600
  601 RRGQSLVVWA ITEGRQAARQ VDSYLTGRPS GLPGPGGVIA TS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle