YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59276032, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.87
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRTGIVLI FLAVFAFVAA EDGESKESVI EQLVVETLVM PESCTITSEM GDTLQIHYTG  60
   61 RLMDGKVIDT SLSREPLVVE LGKRSVITGL EQALVGVCEG QKIKAMIPAH LAYGKRGYPP 120
  121 TIPGDSTLEF EVEVISLSQQ TPWQKLINDI LPLLCLALVP TLLGLVGLYL YNKAHAQPQG 180
  181 KKKSKDKKSK KK

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	149	0.99
Transmembrane Helix	150	172	0.83
Cytoplasmic	173	192	0.85