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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33284837
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTTTSIKMT TLAIQNLFSY VEEENLAAVK VHLDKFKEVD GRSDNGQTPL MLASEQGSLE  60
   61 IVQELIRRGA NVNLDDVDCW SALISAAKEG HVEVVKELLE NSAYIEHRDM GGWTALTWAS 120
  121 YKGRVEVATV LLENGANPNT TGQQYSVYPI IWAAGRGHAE IVKLLLEHGA KVNCSDKYGT 180
  181 TPLIWAARKG HYDCVMHLLE NGADVDQEGA NSMTALIVAV KGGYTEVVKE LLKRNPNVNM 240
  241 TDKDGNTALM IAAKEGYTEI VQDLLDAGTY VNIPDRSGDT VLIGAVRGGH VEIVRALLHK 300
  301 YADIDIRGQE NKTALYWAVE KGNATMVRDI LQCNPDTETT TKDSETPLIK ATKMRSIEVV 360
  361 ELLLDKGAKV SAVDKRGDTP LHIAIRGRSR RLAELLLRNP KDGRLLYRPN KAGETPYNID 420
  421 CSHQKSILTQ IFGARHLSPT ESDGDMLGYD LYSSALADIL SEPTMQPPIC VGLYAQWGSG 480
  481 KSFLLKKLED EMKTFAGQQV EPLFQFSWLV VLLSLLLCGS VALVLGFTVD PKLAIAISLS 540
  541 ILALLYVFFV VVYFGSRREG ESWNWAWVIS TRLARHIGYL ELLLKLMFVN PPELPEQTTR 600
  601 ALPVRFLFTD YNRLSSVGGE TSMAEMIATL SDACEREFGF LATRLFRVFK TEDTQGKKKW 660
  661 KKTCCIPSFV IFLFILGCLI MGMALLAVFK VDGQNQTVNA VLVSMASVVG LALLLNCRTW 720
  721 WQVTDSVLNS QRKRLHSAAN KMHKLKSEGF MKVLKNEVEL MAKMAKTIDG FTQNQTRLVV 780
  781 IIDGLDSCEQ DKVLQMLDTV RVLFSKGPFI SIFASDPHII IKAINQNLNS VLRDSNINGH 840
  841 DYMRNIVHLP VFLNSRGLSS AKKMCAPAPA NGETGNSEGW HEELDRKLSQ NSLGDQTKFG 900
  901 SKTTLNRRDT YRRRQMQRSV TRQMSFDLTK LLVTEDWFSD ISPQTMRRLL NIVSVTGRLL 960
  961 RANQISFNWD RLASWINLTE QWPYRTSWLI LYLEETDGIP DQTNLKTIYE RISKNIPTTK1020
 1021 DVEPLLEIDG DVRSFEVFLS SRTPVLAARD IRTFLPCTVN LDPKLREIIA DVRAAREQVN1080
 1081 MAGVTYPTLP LQEGRPISMY SQQSSACSPT ASFNGPYNPP GVSPQPHSAY FSGMAGPQHP1140
 1141 FYNRGSASVV SGTPSILLSS MSTDVICERV KLIDGIDQNL ISQYTATIKK ANINGRVLSQ1200
 1201 CNIDELKKEM NMNFGDWQLF RTSVLEMRHV ENQVLHEEAP SEQGSITVGH VEPCRHAGAA1260
 1261 AQGVAGNTDT SPMYNFNLSF EELSNVGLEE PPRHVNATWM GTTHRTPSMS SLNSQESSNE1320
 1321 ICKLTDKQQA EYRNAYEDYI ASMSQLELGM EKPVPPFVSQ LMHSSSEDKK KDGNDQDGRK1380
 1381 SVSKRGSTKS GSDNTDYASA DAATLDPITE EDEKVDHGSS KSLLGRKTSG DKVSLFQGAD1440
 1441 LKLKAGGGSR YQKLTSDDEE SEESDNAPLL KDGKKPEAKA SDGGDRSLTK GKDYLSDKKD1500
 1501 SSDSGVRSNE SSPNHSLQDE EADLSQSERA NLIELDEENS ARKRGLPNSL SGLQDPTIAR1560
 1561 MSICSEDQCS LLASSPEESW PSSKSYNLNR TPSNTTLNNN TNAQQGNHIR QPSDSSNTTS1620
 1621 TTTGSDVIIN PGTSTTSATT QNENVRVVHL KRGLNPGDPP EILKVSSETV TFGEERESIL1680
 1681 

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