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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27802861
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHLHKGERLG RVVFSTCDGR TGIDFESTDQ EIDLNMDGTL MMRRSVTLHE GLKEFSVSAW  60
   61 DFSGKKHTVF VRVERVDYHK DHDVNTLMNT SSVQRCLIFP PLTLHENGKG PFPMRLVQIK 120
  121 SDSASETPMA YKITGEGADQ DPKGIFQIDR LSGWVSVTQQ LDREKKASYK LVAHATGVDV 180
  181 NIVEKPFEFI VTVADQNDNK PLFTQNPFNA NVPEALEKGE VFMTVTATDA DDKENTDNAD 240
  241 ISYAIISQDP PSPKPNMFAI NPVSGGISML ETGLDREQWS SYTLVITATD MNGEGGSTTG 300
  301 TAVITVTDSN NNAPLFEQTL YTVSVPENQV GAEVAKLPVT DGDEPESTAW STKYRVIGGD 360
  361 KDGFFNVSTG PSRLEGVITT VKPLNYEKNK QYILSVIVVN DDKFVGPLPT STATVTVNVE 420
  421 DENEPPEFNP KEKFISKPED LPVGSDLVNY TATDPDTEKK QKIIYRIGYD PSVWLSITDS 480
  481 GQIQVKKPMD RESSNVKDGK YKALILALDD DVESPATGTG TLVIELQDVN DNAPVINERT 540
  541 IKLCNRESAP VLLSITDNDG PPFAGPFTVE PQGDTSKNWS VFFNETGHYL SLKPQSQLEQ 600
  601 REYNVVLRVT DREGESQENT IQASVCDCKG EAFQCTNKPV AGISLLGFLG ILGGILLFVL 660
  661 LILKLGKTTV DDVRVNICYD DEECGGEGDQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle